Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGGAGCGGCGGCTGCAC
.(((((((((.(((.((.(((&))).)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022725
GeneSymbolFANCF
Binding site181,202
Score0.846
Seed1
Au0.324
Energy-24.5
Binding len21
Me-7.354
Phylopstem0.4752840666666667
Phylopflank0.08162442000000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure