Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACTTCCCTATATTTGCAGCTGTAT
.(((((((((((.((((.((.&.)).)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022725
GeneSymbolFANCF
Binding site2858,2885
Score0.962
Seed1
Au0.691
Energy-22.1
Binding len21
Me-5.082
Phylopstem1.1652702545454545
Phylopflank0.04971550499999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure