Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACGACTTACATCTGCGCAGCCAATCTCTCACAATGCAAG
((((((((((((((((((((.&))))))))).........)))))).............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022728
GeneSymbolNEUROD6
Binding site1097,1140
Score0.846
Seed1
Au0.647
Energy-22.9
Binding len43
Me-3.938
Phylopstem4.50686471904762
Phylopflank4.956529025000002
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure