Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCATCATTGGTAGCTGCAC
.(((((((((.(.((..((((&))))....)).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022731
GeneSymbolNUCKS1
Binding site4345,4368
Score0.923
Seed1
Au0.603
Energy-22.2
Binding len23
Me-8.14
Phylopstem0.3061050444444444
Phylopflank0.5300290762499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure