Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAACAACGGCAGGCGGCAT
.(((.(((((.(((((..(((&))).))))).)))).).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022731
GeneSymbolNUCKS1
Binding site477,498
Score0.846
Seed0
Au0.544
Energy-19.5
Binding len21
Me-10.737
Phylopstem1.8325798
Phylopflank3.725381125
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure