Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCAGCCTCAGTTGTT
..(((((((.(((((.(((..&)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022731
GeneSymbolNUCKS1
Binding site2992,3009
Score0.923
Seed1
Au0.618
Energy-19.2
Binding len17
Me-6.433
Phylopstem0.2952362857142857
Phylopflank0.04942153125000003
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure