Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACTGCTCATGCTGCT
..(((((((.(((.(((((((&))))))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022731
GeneSymbolNUCKS1
Binding site2297,2317
Score0.846
Seed1
Au0.529
Energy-18.8
Binding len20
Me-7.056
Phylopstem0.39405291428571426
Phylopflank0.035764137500000015
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure