Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTGAACCGCAGGGCAAT
((((..((((((((...((((&))))....)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022740
GeneSymbolHIPK2
Binding site8364,8386
Score0.846
Seed0
Au0.456
Energy-23.0
Binding len22
Me-10.926
Phylopstem1.32075825
Phylopflank0.8534975687500002
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure