Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGTGAGCTGCAGCTGCT
..((((((((((((...((((&)))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022742
GeneSymbolCCDC136
Binding site2272,2294
Score0.923
Seed1
Au0.485
Energy-26.5
Binding len22
Me-5.925
Phylopstem1.8743802500000004
Phylopflank1.31848953625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure