Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCTGCAGCTGCAAT
((((((((((((((.(.....&).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022742
GeneSymbolCCDC136
Binding site3233,3250
Score1.0
Seed1
Au0.397
Energy-25.1
Binding len17
Me-4.673
Phylopstem2.601546285714286
Phylopflank1.4704181925000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure