Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCAGCAGCTGCAGG
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022742
GeneSymbolCCDC136
Binding site1769,1786
Score0.846
Seed1
Au0.397
Energy-24.9
Binding len17
Me-6.762
Phylopstem0.9771595999999999
Phylopflank0.8490139937500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure