Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCTCAATCACAGCTGTGAC
(((((((((.((((((((((.&))))))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022743
GeneSymbolSMYD3
Binding site557,580
Score0.923
Seed1
Au0.529
Energy-19.8
Binding len23
Me-5.18
Phylopstem0.19783891666666667
Phylopflank3.051737225
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure