Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACACCGCTTGGTCTCCAGTGTCTTTGAGCTGCAGC
((((((((((((.(((((((.&)))))))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022744
GeneSymbolRUSF1
Binding site1012,1051
Score1.0
Seed1
Au0.441
Energy-25.6
Binding len39
Me-5.227
Phylopstem2.272371693548387
Phylopflank1.1443040875000003
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end7
PositionCDS
2D Structure