Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACGACCGCTACCGCGACAAGATCCAGCTGCT
..(((((((((((((((....&)))))))))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022745
GeneSymbolATPAF1
Binding site463,495
Score1.0
Seed1
Au0.412
Energy-22.1
Binding len32
Me-4.957
Phylopstem0.6366697870967742
Phylopflank0.40564924375
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end4
PositionCDS
2D Structure