Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCGTGCAAGCTGCT
..(((((((((...(((((((&)))))))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022748
GeneSymbolTNS3
Binding site4141,4161
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len20
Me-10.45
Phylopstem0.07501856
Phylopflank0.649301205
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure