Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCGGGAAGTGGCTGCGGC
((((((((((..((((.((((&)))).))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022749
GeneSymbolFHIP2B
Binding site3235,3258
Score0.846
Seed1
Au0.294
Energy-21.5
Binding len23
Me-10.109
Phylopstem0.48744921999999996
Phylopflank0.18922028375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure