Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGAAACTGCTGCTGCT
..(((((.((((((.(((((.&)))))..)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022755
GeneSymbolIPPK
Binding site3491,3511
Score1.0
Seed0
Au0.426
Energy-20.7
Binding len20
Me-8.006
Phylopstem4.455372999999999
Phylopflank3.601995715000001
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure