Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCAGCCAGCTGGCTGCAT
.((((((((((((((...(((&)))..))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022764
GeneSymbolMTHFSD
Binding site1836,1858
Score0.846
Seed1
Au0.368
Energy-22.5
Binding len22
Me-4.026
Phylopstem1.8780900875000004
Phylopflank0.5262104549999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure