Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAGCCCACGCCGCTTACTCTCAGCGGATGCAGCTGCT
..((((((((((((((((...&)))))))).......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022766
GeneSymbolCERK
Binding site1915,1955
Score0.846
Seed1
Au0.397
Energy-23.1
Binding len40
Me-4.957
Phylopstem-0.9384214102564103
Phylopflank-1.31678103625
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end5
Position3UTR
2D Structure