Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGGGACTGCTGTTGCGGT
(((((((.((((((.(.((((&)))).).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022766
GeneSymbolCERK
Binding site3958,3980
Score0.846
Seed1
Au0.412
Energy-22.4
Binding len22
Me-6.987
Phylopstem2.2393488571428573
Phylopflank3.07681814
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure