Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGCACCTGAGAAGGCAGCTGTG
..((((((((..((...((((&.))))..))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022774
GeneSymbolEXO5
Binding site512,538
Score0.846
Seed1
Au0.441
Energy-19.6
Binding len20
Me-12.097
Phylopstem2.383794875
Phylopflank1.336164825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure