Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGGAGGTGGAATCAGTAGCAGCAGCAGCAGCCGCGGTGGCAGT
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022776
GeneSymbolOSBPL11
Binding site794,841
Score1.0
Seed0
Au0.426
Energy-24.2
Binding len18
Me-8.057
Phylopstem0.43528612727272725
Phylopflank1.56867907125
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure