Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGTCGGCAGCAGCTGGAAT
((.(((((((.((((..((((&))))..)))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022778
GeneSymbolCEP85
Binding site985,1007
Score0.846
Seed0
Au0.544
Energy-21.7
Binding len22
Me-8.553
Phylopstem4.916547142857143
Phylopflank3.186858969
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure