Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACGGCTGCATGGCGGCAT
.(((.(((((((((((.(((.&))))))))))))..)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022779
GeneSymbolDDX31
Binding site1398,1419
Score0.846
Seed0
Au0.485
Energy-20.4
Binding len21
Me-7.912
Phylopstem0.17741475384615385
Phylopflank-0.27983401249999995
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure