Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTGCAGCACAGTCTGCAGC
(((((((((..((((((.(((&)))..)))))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022779
GeneSymbolDDX31
Binding site2175,2198
Score0.846
Seed1
Au0.338
Energy-19.9
Binding len23
Me-8.005
Phylopstem5.9530912
Phylopflank3.0552158025000002
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure