Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCATTTTAGCTCTGCATGCAGCCCCAGCAGGCTGCGT
.((((((((((((((((((((&))))................)))))))...)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022780
GeneSymbolRMND5A
Binding site2131,2172
Score0.846
Seed1
Au0.529
Energy-21.7
Binding len41
Me-3.793
Phylopstem1.0709726749999997
Phylopflank1.2793325624999998
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure