Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCCGCAGCAGGAAT
((.(.((((((((((((.(((&))).)))))))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022783
GeneSymbolDEPTOR
Binding site1200,1222
Score1.0
Seed0
Au0.412
Energy-26.9
Binding len22
Me-9.614
Phylopstem4.531940666666666
Phylopflank5.36053931
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure