Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGACGGCCCGGCTCGTGCAGT
(((((((((.((((((..((.&))..)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022803
GeneSymbolUCP3
Binding site352,375
Score0.846
Seed1
Au0.294
Energy-19.7
Binding len23
Me-5.18
Phylopstem0.01685183333333337
Phylopflank0.012752792499999999
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure