Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGGCTGGCCGCAGCCACTGTAGC
((((((((((((((((..(((&)))....)).)))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022807
GeneSymbolSNRPN
Binding site11,39
Score0.846
Seed1
Au0.368
Energy-20.1
Binding len28
Me-3.938
Phylopstem-0.67305057245
Phylopflank-0.08947492742499999
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position5UTR
2D Structure