Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCAAAGTGCAGGAAGGGGAGCGGCAGCTGCGGG
((((((((((.(((.(.....&.).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022809
GeneSymbolCDC25C
Binding site1374,1413
Score0.923
Seed1
Au0.382
Energy-22.5
Binding len18
Me-7.498
Phylopstem1.2731906
Phylopflank1.3306540912499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure