Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACAACCTGCTCCGGCTGCAT
.(((((((((((((((..(((&))).)))))).))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022827
GeneSymbolSPATA20
Binding site2030,2054
Score0.846
Seed1
Au0.382
Energy-22.7
Binding len24
Me-3.793
Phylopstem3.5826128947368425
Phylopflank4.079443525
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure