Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACCGCAGCTGACAT
.(((((((((((((.......&))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022829
GeneSymbolSLC13A3
Binding site2519,2534
Score0.923
Seed1
Au0.5
Energy-22.1
Binding len15
Me-4.762
Phylopstem5.246361571428571
Phylopflank4.14920592875
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end1
Position3UTR
2D Structure