Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAGCGCTAGCTGAGGCTGCAGA
((((((((.(((((((..(((&))).....)).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022830
GeneSymbolTUT1
Binding site485,511
Score0.923
Seed1
Au0.426
Energy-19.1
Binding len26
Me-4.994
Phylopstem-0.16658707499999997
Phylopflank-0.14045479375000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure