Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACATGGAGCAGCTGCAC
.(((((((((...((((....&))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022832
GeneSymbolUSP46
Binding site928,946
Score1.0
Seed1
Au0.485
Energy-20.9
Binding len18
Me-11.254
Phylopstem0.11406549999999996
Phylopflank-0.01050927625000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure