Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGCCAGGG
.((((((..(((((((......&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022834
GeneSymbolVWA1
Binding site2807,2821
Score0.846
Seed1
Au0.338
Energy-19.5
Binding len14
Me-7.163
Phylopstem-1.0775825
Phylopflank-0.6028008062499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure