Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAAAGCAGCTGCC
..((((((((..(((((....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022839
GeneSymbolMRPS11
Binding site2506,2521
Score0.846
Seed1
Au0.529
Energy-20.2
Binding len15
Me-11.129
Phylopstem-0.668844425
Phylopflank-0.24683236749999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure