Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAGACAACCGCTCTGGGGAGCTGCAC
.(((((((((((((((.(((.&)))..)))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022843
GeneSymbolPCDH20
Binding site1086,1114
Score0.846
Seed1
Au0.397
Energy-26.1
Binding len28
Me-3.793
Phylopstem1.3749022727272726
Phylopflank1.6787953674999998
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure