Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGCAGTCGCAGCTGCC
..((((((((((((((..(((&))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022843
GeneSymbolPCDH20
Binding site989,1008
Score1.0
Seed1
Au0.279
Energy-25.1
Binding len19
Me-4.957
Phylopstem0.974196557142857
Phylopflank1.5863709275000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure