Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAATTGCAGCTGTC
..(((((((((((((...(((&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022843
GeneSymbolPCDH20
Binding site1699,1717
Score0.923
Seed1
Au0.471
Energy-22.6
Binding len18
Me-5.19
Phylopstem3.4527843846153843
Phylopflank3.036205281249999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure