Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCGCAGGAAGCTGCAGC
(((((((((((((((......&))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022844
GeneSymbolMYH11
Binding site5798,5818
Score0.846
Seed1
Au0.353
Energy-22.5
Binding len20
Me-4.171
Phylopstem3.3073934842105266
Phylopflank3.6604143375
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end2
PositionCDS
2D Structure