Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTATAGAGTATGTCAGGTT
(((((((((((..(((((((((&)))))))))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022900
GeneSymbolCASD1
Binding site1732,1755
Score0.923
Seed1
Au0.662
Energy-26.2
Binding len23
Me-8.574
Phylopstem5.811347181818182
Phylopflank5.901984552500002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure