Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAATGAAGCTGCAGT
((((((((...((((((((..&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022900
GeneSymbolCASD1
Binding site967,986
Score0.923
Seed1
Au0.647
Energy-21.8
Binding len19
Me-9.061
Phylopstem5.9399751125
Phylopflank3.8283835249999996
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure