Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAACAGCAAAGCTGCT
..((((((...(((((.((((&))))...)))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022903
GeneSymbolCCDC71
Binding site1367,1388
Score0.846
Seed1
Au0.471
Energy-19.6
Binding len21
Me-10.081
Phylopstem1.3545645666666666
Phylopflank1.0997124862500003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure