Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTACGCCGCTGCAGCAC
.(((.((.((((.((((.(((&))).)))))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022908
GeneSymbolNT5DC2
Binding site1836,1856
Score0.821
Seed0
Au0.353
Energy-20.5
Binding len20
Me-11.515
Phylopstem-0.1800492
Phylopflank-0.18550745375
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure