Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCGAAGTGCTAGGA
.((((((((.....((((....&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022909
GeneSymbolCENPH
Binding site1250,1267
Score0.846
Seed1
Au0.397
Energy-15.4
Binding len17
Me-13.353
Phylopstem-0.22196075
Phylopflank-0.1486139125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure