Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTACAACTGAAAGCAGCTGTC
..(((((((((((((((.(((&))).)))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022912
GeneSymbolREEP1
Binding site3115,3139
Score1.0
Seed1
Au0.618
Energy-22.2
Binding len24
Me-4.957
Phylopstem2.595382736842105
Phylopflank3.1333392437500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure