Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAGCCCTGTAGTTGCAAA
((((((((((((((((.....&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022918
GeneSymbolTMEM135
Binding site5369,5388
Score0.923
Seed1
Au0.588
Energy-19.6
Binding len19
Me-3.938
Phylopstem-0.19860127211111112
Phylopflank0.09429226769999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure