Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTTGTGACTGCACTGTAT
.(((((.(((((((((((((.&)))))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023003
GeneSymbolTM6SF1
Binding site864,888
Score0.808
Seed0
Au0.574
Energy-20.7
Binding len24
Me-5.337
Phylopstem2.6064196444444443
Phylopflank4.086332977500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure