Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGACAATAAAGGTCAGGAATATCCCGCTATAGTAGAATTTGCACCTTTTCAAAAAGCTGCAAA
((((((((....(((.(((((&.)))))..)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023010
GeneSymbolUPF3B
Binding site391,457
Score0.923
Seed1
Au0.662
Energy-18.6
Binding len22
Me-12.641
Phylopstem0.5309961000000001
Phylopflank0.358384605
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure