Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGTATGATCCAGGAGCTCGCT
..(((((((((((((((((((&)))))))))))))..........)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023011
GeneSymbolUPF3A
Binding site1350,1381
Score0.846
Seed1
Au0.368
Energy-23.5
Binding len31
Me-4.957
Phylopstem2.1861721966666665
Phylopflank0.9235928137500001
Longest consecutive pairings13
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure